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A genome-wide analysis of loss of heterozygosity and chromosomal copy number variation in Proteus syndrome using high-density SNP microarrays.
[proteus syndrome]
Excessive
cell
proliferation
and
genetic
changes
such
as
loss
of
an
allele
(
loss
of
heterozygosity
(
LOH
)
)
or
amplifications
or
deletions
of
parts
of
chromosomes
(
copy
number
variations
(
CNV
)
)
are
common
findings
in
cancers
.
It
is
unknown
whether
these
changes
are
also
present
in
patients
with
overgrowth
syndromes
,
although
the
presence
of
small
-scale
CNVs
(
such
as
duplication
of
11
p
15
in
Beckwith-
Wiedemann
syndrome
)
,
excessive
cell
proliferation
and
an
increased
frequency
of
tumors
have
all
been
reported
in
these
patients
.
We
present
results
of
a
genome-
wide
scan
for
LOH
and
CNV
in
Proteus
syndrome
(
PS
)
,
a
severely
disfiguring
overgrowth
syndrome
.
We
investigated
CNV
and
LOH
in
DNA
derived
from
affected
and
normal
tissue
samples
from
six
PS
patients
using
Affymetrix
GeneChip
Mapping
250
 
K
Nsp
high
-density
single
-nucleotide
polymorphism
microarrays
.
Analysis
revealed
that
LOH
and
CNVs
were
not
common
in
PS
.
We
attempted
to
validate
selected
CNVs
detected
by
microarray
analysis
using
quantitative
genomic
PCR
,
but
the
observed
changes
were
not
confirmed
.
These
results
suggest
that
large
-scale
genome-
wide
CNVs
and
LOH
as
seen
in
cancer
syndromes
are
not
characteristic
findings
in
PS
,
although
we
can
not
rule
out
the
possibility
that
newer
arrays
with
a
higher
number
of
probes
could
uncover
smaller
CNVs
not
detected
in
this
study
.
Diseases
Validation
Diseases presenting
"genetic changes such as loss of an allele"
symptom
proteus syndrome
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