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Genetic variation in regulatory DNA elements: the case of OCA2 transcriptional regulation.
[oculocutaneous albinism]
Mutations
within
the
OCA
2
gene
or
the
complete
absence
of
the
OCA
2
protein
leads
to
oculocutaneous
albinism
type
2
.
The
OCA
2
protein
plays
a
central
role
in
melanosome
biogenesis
,
and
it
is
a
strong
determinant
of
the
eumelanin
content
in
melanocytes
.
Transcript
levels
of
the
OCA
2
gene
are
strongly
correlated
with
pigmentation
intensities
.
Recent
studies
demonstrated
that
the
transcriptional
level
of
OCA
2
is
to
a
large
extent
determined
by
the
noncoding
SNP
rs
12913832
located
21
.
5
kb
upstream
of
the
OCA
2
gene
promoter
.
In
this
review
,
we
discuss
current
hypotheses
and
the
available
data
on
the
mechanism
of
OCA
2
transcriptional
regulation
and
how
this
is
influenced
by
genetic
variation
.
Finally
,
we
will
explore
how
future
epigenetic
studies
can
be
used
to
advance
our
insight
into
the
functional
biology
that
connects
genetic
variation
to
human
pigmentation
.
Diseases
Validation
Diseases presenting
"pigmentation"
symptom
aniridia
congenital adrenal hyperplasia
congenital toxoplasmosis
cushing syndrome
epidermolysis bullosa simplex
erythropoietic protoporphyria
gm1 gangliosidosis
hirschsprung disease
homocystinuria without methylmalonic aciduria
junctional epidermolysis bullosa
kallmann syndrome
kindler syndrome
oculocutaneous albinism
oral submucous fibrosis
phenylketonuria
proteus syndrome
wiskott-aldrich syndrome
This symptom has already been validated