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The FIC1 gene: structure and polymorphisms in baboon.
[benign recurrent intrahepatic cholestasis]
A
genome
scan
performed
on
648
pedigreed
baboons
to
detect
and
localize
quantitative
trait
loci
(
QTL
)
for
lipoprotein
phenotypes
that
are
known
risk
factors
for
atherosclerosis
indicated
the
presence
of
a
QTL
on
chromosome
18
q
that
exerts
a
major
influence
on
HDL-cholesterol
(
HDL-C
)
related
phenotypes
.
Inspection
of
the
human
gene
map
revealed
that
the
familial
intrahepatic
cholestatis
gene
1
(
FIC
1
)
maps
to
the
homologous
region
of
baboon
chromosome
18
containing
the
major
QTL
influencing
HDL-C
phenotypes
.
FIC
1
is
a
strong
biological
candidate
for
this
QTL
because
HDL-C
is
the
preferred
precursor
for
bile
acid
synthesis
.
In
this
study
,
we
cloned
and
sequenced
FIC
1
cDNA
and
found
that
it
is
highly
conserved
between
human
and
baboon
.
We
also
sequenced
FIC
1
cDNAs
from
a
panel
of
unrelated
baboons
revealing
single
nucleotide
polymorphisms
(
SNPs
)
and
a
polymorphic
dinucleotide
repeat
.
None
of
the
baboon
SNPs
corresponded
to
human
FIC
1
mutations
associated
with
familial
intrahepatic
cholestasis
or
benign
recurrent
intrahepatic
cholestasis
disorders
.
Diseases
Validation
Diseases presenting
"single nucleotide polymorphisms"
symptom
adrenomyeloneuropathy
alpha-thalassemia
benign recurrent intrahepatic cholestasis
congenital adrenal hyperplasia
dentin dysplasia
esophageal adenocarcinoma
esophageal carcinoma
esophageal squamous cell carcinoma
familial hypocalciuric hypercalcemia
hirschsprung disease
neonatal adrenoleukodystrophy
oculocutaneous albinism
oligodontia
pendred syndrome
primary effusion lymphoma
scrub typhus
triple a syndrome
waldenström macroglobulinemia
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